SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_093001364
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__SynT
Genomic region: chr1:28669041-28677014
Size: 7973
Super-enhancer rank 1364
Number of SE elements: 8
ChIP density(Case|Control): 16958.571|812.4487
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GMEB1;
ROSE Overlap GMEB1;
ROSE Proximal TAF12; RNU11; GMEB1;
ROSE Closest GMEB1;
Lasso TAF12; GMEB1; RAB42; YTHDF2;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093001364 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers