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Super-enhancer overview

SE ID: SE_02_092901231
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr16:25134781-25153608
Size: 18827
Super-enhancer rank 1231
Number of SE elements: 10
ChIP density(Case|Control): 13521.5514|2084.1489
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LCMT1-AS2 ;
ROSE Overlap LCMT1-AS2 ; LCMT1 ;
ROSE Proximal LCMT1 ; LCMT1-AS1 ;
ROSE Closest LCMT1-AS2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LCMT1-AS2 ; LCMT1-AS1 ; AQP8 ; LCMT1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901231 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers