SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092901212
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr18:12271857-12288539
Size: 16682
Super-enhancer rank 1212
Number of SE elements: 13
ChIP density(Case|Control): 13118.7248|1468.016
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TUBB6 ;
ROSE Overlap CIDEA ;
ROSE Proximal TUBB6 ;
ROSE Closest CIDEA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA AFG3L2 ; TUBB6 ; CIDEA ; C18orf61 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901212 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers