SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092901171
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:154999585-155002121
Size: 2536
Super-enhancer rank 1171
Number of SE elements: 1
ChIP density(Case|Control): 12118.7832|199.076
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZBTB7B ;
ROSE Overlap ;
ROSE Proximal CKS1B ; PBXIP1 ; SHC1 ; DCST2 ; PYGO2 ; LENEP ; ADAM15 ; MIR4258 ; FLAD1 ; LOC100505666 ; ZBTB7B ; DCST1 ;
ROSE Closest ZBTB7B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ADAM15 ; FLAD1 ; SHC1 ; DCST1 ; LOC100505666 ; DCST2 ; CKS1B ; PYGO2 ; ZBTB7B ; PMVK ; MIR4258 ; EFNA4 ; LENEP ; PBXIP1 ; EFNA3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901171 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers