SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092901149
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr6:89067632-89085041
Size: 17409
Super-enhancer rank 1149
Number of SE elements: 5
ChIP density(Case|Control): 13538.9793|1465.8378
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PNRC1 ;
ROSE Overlap PNRC1 ;
ROSE Proximal SRSF12 ;
ROSE Closest PNRC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PNRC1 ; PM20D2 ; SRSF12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901149 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers