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Super-enhancer overview

SE ID: SE_02_092901039
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr2:85602764-85608672
Size: 5908
Super-enhancer rank 1039
Number of SE elements: 1
ChIP density(Case|Control): 13508.0512|619.1584
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP39;
ROSE Overlap C2orf68; USP39;
ROSE Proximal RNF181; VAMP8; USP39; GGCX; VAMP5; TMEM150A;
ROSE Closest USP39;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901039 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers