SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092901038
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr12:7959048-7995693
Size: 36645
Super-enhancer rank 1038
Number of SE elements: 25
ChIP density(Case|Control): 16123.8|3228.4245
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC2A3 ;
ROSE Overlap ;
ROSE Proximal SLC2A3 ; FOXJ2 ;
ROSE Closest SLC2A3 ;
Lasso C3AR1 ; SLC2A3 ; NECAP1 ;
PreSTIGE ;
ABC ;
BETA SLC2A3 ; C3AR1 ; FOXJ2 ; SLC2A14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901038 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers