SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092901001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr11:73779071-73830028
Size: 50957
Super-enhancer rank 1001
Number of SE elements: 10
ChIP density(Case|Control): 18064.2565|4866.3935
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MRPL48 ;
ROSE Overlap MRPL48 ;
ROSE Proximal RAB6A ; PAAF1 ; COA4 ;
ROSE Closest MRPL48 ;
Lasso RAB6A ;
PreSTIGE ;
ABC ;
BETA RAB6A ; MRPL48 ; PAAF1 ; COA4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers