SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900852
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:19141756-19181874
Size: 40118
Super-enhancer rank 852
Number of SE elements: 20
ChIP density(Case|Control): 18939.7078|4497.2278
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD3A ;
ROSE Overlap LOC388436 ; GRAPL ;
ROSE Proximal LOC79999 ; SNORD3C ; SNORD3A ; SNORD3D ;
ROSE Closest SNORD3A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD3D ; EPN2 ; LOC79999 ; LOC388436 ; SNORD3B-1 ; SNORD3A ; GRAPL ; SNORD3B-2 ; SNORD3C ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900852 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers