SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092900849
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr5:126354177-126377264
Size: 23087
Super-enhancer rank 849
Number of SE elements: 14
ChIP density(Case|Control): 16421.7831|1960.0863
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GRAMD3 ;
ROSE Overlap GRAMD3 ;
ROSE Proximal GRAMD3 ;
ROSE Closest GRAMD3 ;
Lasso GRAMD3 ;
PreSTIGE ;
ABC ;
BETA LOC101927488 ; GRAMD3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900849 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers