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Super-enhancer overview

SE ID: SE_02_092900840
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:19064157-19111144
Size: 46987
Super-enhancer rank 840
Number of SE elements: 16
ChIP density(Case|Control): 20086.9425|5525.6712
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC79999 ;
ROSE Overlap LOC388436 ;
ROSE Proximal LOC79999 ; GRAPL ; SNORD3B-1 ; GRAP ; SNORD3D ;
ROSE Closest LOC388436 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD3D ; LOC79999 ; GRAP ; SNORD3B-1 ; LOC388436 ; GRAPL ; FAM83G ; SNORD3B-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900840 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers