SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900839
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr3:113744185-113750461
Size: 6276
Super-enhancer rank 839
Number of SE elements: 3
ChIP density(Case|Control): 15176.6232|586.1784
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATP6V1A ;
ROSE Overlap ATP6V1A ; NAA50 ;
ROSE Proximal KIAA2018 ; NAA50 ;
ROSE Closest ATP6V1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NAA50 ; ATP6V1A ; GRAMD1C ; KIAA2018 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900839 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers