SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900747
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:48859233-48876711
Size: 17478
Super-enhancer rank 747
Number of SE elements: 6
ChIP density(Case|Control): 17369.6364|1753.0434
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R15A ;
ROSE Overlap PLEKHA4 ; PPP1R15A ;
ROSE Proximal NUCB1 ; PLEKHA4 ; TULP2 ; HSD17B14 ; BCAT2 ; NUCB1-AS1 ;
ROSE Closest PLEKHA4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLEKHA4 ; BCAT2 ; DHDH ; BAX ; TULP2 ; PPP1R15A ; NUCB1-AS1 ; FTL ; NUCB1 ; HSD17B14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900747 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers