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Super-enhancer overview

SE ID: SE_02_092900460
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr11:61149307-61167544
Size: 18237
Super-enhancer rank 460
Number of SE elements: 12
ChIP density(Case|Control): 22305.6747|2000.5989
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS37C ;
ROSE Overlap VPS37C ;
ROSE Proximal PGA3 ; CD5 ;
ROSE Closest VPS37C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PGA3 ; PGA4 ; CD5 ; VPS37C ; PGA5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900460 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers