SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900430
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:1082474-1114541
Size: 32067
Super-enhancer rank 430
Number of SE elements: 15
ChIP density(Case|Control): 22988.8323|1956.087
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POLR2E ;
ROSE Overlap SBNO2 ; HMHA1 ; GPX4 ; POLR2E ;
ROSE Proximal ABCA7 ;
ROSE Closest POLR2E ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPX4 ; RNU6-7 ; CNN2 ; HMHA1 ; RNU6-9 ; RNU6-1 ; ABCA7 ; GRIN3B ; TMEM259 ; RNU6-8 ; POLR2E ; RNU6-2 ; SBNO2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900430 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers