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Super-enhancer overview

SE ID: SE_02_092900426
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:145977789-146001768
Size: 23979
Super-enhancer rank 426
Number of SE elements: 14
ChIP density(Case|Control): 23861.5029|2712.0249
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TXNIP ;
ROSE Overlap TXNIP ; POLR3GL ;
ROSE Proximal ANKRD34A ; HFE2 ; LIX1L ;
ROSE Closest TXNIP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GNRHR2 ; RBM8A ; POLR3GL ; LIX1L ; ITGA10 ; TXNIP ; RNVU1-6 ; HFE2 ; PEX11B ; LOC101928979 ; ANKRD34A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900426 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers