SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900413
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:26274863-26315947
Size: 41084
Super-enhancer rank 413
Number of SE elements: 22
ChIP density(Case|Control): 25180.3836|3713.9936
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBXN11 ;
ROSE Overlap CEP85 ; UBXN11 ; SH3BGRL3 ;
ROSE Proximal UBXN11 ; LOC101928303 ; CEP85 ; AIM1L ; CD52 ;
ROSE Closest UBXN11 ;
Lasso DHDDS ; SH3BGRL3 ; CNKSR1 ; UBXN11 ; CD52 ; AIM1L ;
PreSTIGE ;
ABC ;
BETA LOC101928303 ; UBXN11 ; CEP85 ; SH3BGRL3 ; ZNF683 ; CD52 ; AIM1L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900413 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers