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Super-enhancer overview

SE ID: SE_02_092900408
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:42192198-42220131
Size: 27933
Super-enhancer rank 408
Number of SE elements: 11
ChIP density(Case|Control): 24578.2467|2899.4454
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DEDD2 ;
ROSE Overlap DEDD2 ;
ROSE Proximal DEDD2 ; CIC ; ERF ; ZNF526 ; GSK3A ;
ROSE Closest DEDD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC100505622 ; PAFAH1B3 ; ZNF526 ; CIC ; DEDD2 ; POU2F2 ; PRR19 ; GSK3A ; ERF ; MIR4323 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900408 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers