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Super-enhancer overview

SE ID: SE_02_092900403
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr3:48458556-48478058
Size: 19502
Super-enhancer rank 403
Number of SE elements: 10
ChIP density(Case|Control): 23577.918|1757.1302
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TREX1;
ROSE Overlap SHISA5; ATRIP; TREX1;
ROSE Proximal PLXNB1; TMA7; CCDC51; SHISA5;
ROSE Closest TREX1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900403 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers