SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900401
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:75675291-75701249
Size: 25958
Super-enhancer rank 401
Number of SE elements: 15
ChIP density(Case|Control): 24602.9924|2691.8446
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RECQL5 ;
ROSE Overlap SAP30BP ;
ROSE Proximal SMIM5 ; ITGB4 ; SMIM6 ; SAP30BP ; RECQL5 ;
ROSE Closest RECQL5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UNK ; SAP30BP ; ITGB4 ; MIR4738 ; SMIM5 ; SMIM6 ; RECQL5 ; H3F3B ; GALK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900401 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers