SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900352
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr13:19771369-19812663
Size: 41294
Super-enhancer rank 352
Number of SE elements: 17
ChIP density(Case|Control): 26944.335|3794.9186
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSPC1 ;
ROSE Overlap PSPC1 ;
ROSE Proximal PSPC1 ;
ROSE Closest PSPC1 ;
Lasso PSPC1 ; ZMYM5 ;
PreSTIGE ;
ABC ;
BETA PSPC1 ; ZMYM5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900352 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers