SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092900293
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:201500622-201542362
Size: 41740
Super-enhancer rank 293
Number of SE elements: 16
ChIP density(Case|Control): 29076.084|4044.606
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPS10P7 ;
ROSE Overlap CSRP1 ; RPS10P7 ;
ROSE Proximal CSRP1 ; PHLDA3 ;
ROSE Closest RPS10P7 ;
Lasso TNNT2 ; LAD1 ; TNNI1 ; CSRP1 ; PHLDA3 ;
PreSTIGE ;
ABC ;
BETA TNNI1 ; PHLDA3 ; CSRP1 ; RPS10P7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900293 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers