SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092900229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr3:129592415-129648361
Size: 55946
Super-enhancer rank 229
Number of SE elements: 35
ChIP density(Case|Control): 33450.1134|5091.086
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXND1;
ROSE Overlap PLXND1; TMCC1;
ROSE Proximal H1FOO;
ROSE Closest PLXND1;
Lasso PLXND1; H1FOO;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers