SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092900170
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr11:65416618-65421288
Size: 4670
Super-enhancer rank 170
Number of SE elements: 1
ChIP density(Case|Control): 32012.85|435.244
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEAT1;
ROSE Overlap ;
ROSE Proximal SLC25A45; FRMD8; MIR612; NEAT1;
ROSE Closest NEAT1;
Lasso KAT5; SLC25A45; MAP3K11; MRPL49; DPF2; CDC42EP2; SCYL1; FRMD8; SYVN1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900170 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers