SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900162
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr20:25016704-25065826
Size: 49122
Super-enhancer rank 162
Number of SE elements: 47
ChIP density(Case|Control): 36792.378|4352.2092
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ACSS1 ;
ROSE Overlap ACSS1 ;
ROSE Proximal APMAP ; VSX1 ;
ROSE Closest ACSS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ACSS1 ; APMAP ; VSX1 ; CST7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900162 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers