SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900150
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:75290532-75369131
Size: 78599
Super-enhancer rank 150
Number of SE elements: 39
ChIP density(Case|Control): 41366.6537|7789.1609
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC25A19 ;
ROSE Overlap GRB2 ;
ROSE Proximal LOC100287042 ; MRPS7 ; MIR3678 ; MIF4GD ; SLC25A19 ; GGA3 ;
ROSE Closest SLC25A19 ;
Lasso HN1 ; MIF4GD ; SUMO2 ; GGA3 ; KCTD2 ; MRPS7 ; SLC25A19 ; NUP85 ;
PreSTIGE ;
ABC ;
BETA GRB2 ; GGA3 ; MIF4GD ; MIR3678 ; MRPS7 ; LOC100287042 ; SLC25A19 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900150 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers