SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900053
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr15:72160844-72200895
Size: 40051
Super-enhancer rank 53
Number of SE elements: 28
ChIP density(Case|Control): 53488.1105|4433.6457
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GRAMD2 ;
ROSE Overlap GRAMD2 ; PKM ;
ROSE Proximal SENP8 ; MYO9A ; PKM ;
ROSE Closest GRAMD2 ;
Lasso MYO9A ; PKM ; GRAMD2 ;
PreSTIGE ;
ABC ;
BETA SENP8 ; PKM ; PARP6 ; MYO9A ; GRAMD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900053 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers