SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:38818685-38870335
Size: 51650
Super-enhancer rank 20
Number of SE elements: 34
ChIP density(Case|Control): 70125.205|4689.82
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPL ;
ROSE Overlap HNRNPL ; ECH1 ; RINL ;
ROSE Proximal NFKBIB ; SIRT2 ; LGALS7B ; RINL ; LGALS4 ; LGALS7 ; CCER2 ;
ROSE Closest HNRNPL ;
Lasso ECH1 ; HNRNPL ; SARS2 ; ACTN4 ; FBXO27 ; CAPN12 ;
PreSTIGE ;
ABC ;
BETA NFKBIB ; LGALS4 ; RINL ; SIRT2 ; ECH1 ; LGALS7B ; CCER2 ; HNRNPL ; LGALS7 ; SARS2 ; MRPS12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers