SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_089301049
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Heart
Biosample name: left ventricle_LV1226
Genomic region: chr1:12335840-12347645
Size: 11805
Super-enhancer rank 1049
Number of SE elements: 4
ChIP density(Case|Control): 14763.333|1398.8925
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS13D;
ROSE Overlap VPS13D;
ROSE Proximal ;
ROSE Closest VPS13D;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_089301049 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers