SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_088400621
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: LoVo
Genomic region: chr12:56114419-56120286
Size: 5867
Super-enhancer rank 621
Number of SE elements: 1
ChIP density(Case|Control): 38650.6226|1311.2745
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL41;
ROSE Overlap ZC3H10; RPL41;
ROSE Proximal ERBB3; MYL6B; MYL6; ESYT1; PA2G4;
ROSE Closest RPL41;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_088400621 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers