SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_088400339
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: LoVo
Genomic region: chr12:120944424-120985211
Size: 40787
Super-enhancer rank 339
Number of SE elements: 6
ChIP density(Case|Control): 56669.4578|6248.5684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNF1A-AS1;
ROSE Overlap HNF1A-AS1; HNF1A;
ROSE Proximal SPPL3; XLOC_009911; C12orf43;
ROSE Closest HNF1A-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_088400339 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers