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Super-enhancer overview

SE ID: SE_02_088400016
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: LoVo
Genomic region: chr7:27181772-27214110
Size: 32338
Super-enhancer rank 16
Number of SE elements: 1
ChIP density(Case|Control): 182011.1992|6904.163
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXA13;
ROSE Overlap HOXA11-AS; HOTTIP; HOXA11; HOXA13;
ROSE Proximal EVX1; HOXA10; HOXA10-AS; HOXA-AS3; HOXA7; HOXA5; MIR196B; HOXA9; HOXA6; HOXA10-HOXA9; EVX1-AS;
ROSE Closest HOXA13;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_088400016 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers