SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_086000259
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Induced pluripotent stem cell line
Tissue type: iPSCs
Biosample name: SAH_SMARCB1_K364del/+
Genomic region: chr3:9397623-9404154
Size: 6531
Super-enhancer rank 259
Number of SE elements: 1
ChIP density(Case|Control): 17036.7666|1152.0684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SETD5;
ROSE Overlap SETD5;
ROSE Proximal THUMPD3; THUMPD3-AS1; SETD5;
ROSE Closest SETD5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_086000259 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers