SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_085900019
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Prostate
Biosample name: PC3
Genomic region: chr1:228608199-228649391
Size: 41192
Super-enhancer rank 19
Number of SE elements: 1
ChIP density(Case|Control): 199340.4456|20583.6424
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNA5S9;
ROSE Overlap RNA5S11; MIR7641-2; RNA5S1; DUSP5P1; RNA5S2; RNA5S3; RNA5S4; RNA5S6; RHOU; RNA5S10; RNA5S9;
ROSE Proximal RNA5S5; RNA5S15;
ROSE Closest RNA5S9;
Lasso RNF187; HIST3H2A;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_085900019 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers