SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_085800709
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Glioblastoma
Biosample name: Glioblastoma neurosphere cell_HF-3177
Genomic region: chr1:32332270-32352645
Size: 20375
Super-enhancer rank 709
Number of SE elements: 3
ChIP density(Case|Control): 29959.4|2198.4625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MARCKSL1;
ROSE Overlap HDAC1; MARCKSL1;
ROSE Proximal TSSK3; BSDC1; FAM229A;
ROSE Closest MARCKSL1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_085800709 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers