SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_085600320
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Glioblastoma
Biosample name: Glioblastoma neurosphere cell_HF-3016
Genomic region: chr5:132250747-132270359
Size: 19612
Super-enhancer rank 320
Number of SE elements: 6
ChIP density(Case|Control): 35270.2208|5299.1624
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDLIM4;
ROSE Overlap PDLIM4;
ROSE Proximal MIR6830; PDLIM4; P4HA2; SLC22A4;
ROSE Closest PDLIM4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_085600320 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers