SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082700963
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr20:33654277-33670663
Size: 16386
Super-enhancer rank 963
Number of SE elements: 5
ChIP density(Case|Control): 5104.239|1379.7012
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C20ORF144 ;
ROSE Overlap C20orf144 ; NECAB3 ; ACTL10 ;
ROSE Proximal E2F1 ; NECAB3 ; PXMP4 ;
ROSE Closest C20orf144 ;
Lasso NECAB3 ; ACTL10 ;
PreSTIGE ;
ABC ;
BETA NECAB3 ; E2F1 ; ZNF341 ; ACTL10 ; PXMP4 ; C20orf144 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700963 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers