SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700761
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr3:9888296-9897398
Size: 9102
Super-enhancer rank 761
Number of SE elements: 2
ChIP density(Case|Control): 5365.629|827.3718
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JAGN1 ;
ROSE Overlap JAGN1 ;
ROSE Proximal CRELD1 ; CIDEC ; IL17RC ; RPUSD3 ; IL17RE ;
ROSE Closest JAGN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TADA3 ; EMC3 ; CIDEC ; IL17RE ; CRELD1 ; IL17RC ; PRRT3 ; TTLL3 ; RPUSD3 ; PRRT3-AS1 ; JAGN1 ; ARPC4 ; EMC3-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700761 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers