SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700623
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr1:159910161-159921412
Size: 11251
Super-enhancer rank 623
Number of SE elements: 5
ChIP density(Case|Control): 6652.7163|1491.8826
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TAGLN2 ;
ROSE Overlap TAGLN2 ;
ROSE Proximal VSIG8 ; CFAP45 ; LINC01133 ; IGSF9 ; SLAMF9 ; MIR4259 ;
ROSE Closest TAGLN2 ;
Lasso ;
PreSTIGE ;
ABC IGSF9 ;
BETA LINC01133 ; SLAMF9 ; TAGLN2 ; SLAMF8 ; C1orf204 ; IGSF9 ; MIR4259 ; CFAP45 ; VSIG8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700623 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers