SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082700436
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr16:30067689-30089115
Size: 21426
Super-enhancer rank 436
Number of SE elements: 5
ChIP density(Case|Control): 8656.104|2284.0116
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4C ;
ROSE Overlap ALDOA ; PPP4C ; TBX6 ;
ROSE Proximal ALDOA ; C16orf92 ; FAM57B ; YPEL3 ; MAPK3 ; GDPD3 ;
ROSE Closest PPP4C ;
Lasso ;
PreSTIGE ;
ABC ALDOA ; PPP4C ; TBX6 ;
BETA DOC2A ; C16orf92 ; INO80E ; YPEL3 ; GDPD3 ; MAPK3 ; FAM57B ; ALDOA ; PPP4C ; TBX6 ; HIRIP3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700436 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers