SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700413
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr3:49395838-49417522
Size: 21684
Super-enhancer rank 413
Number of SE elements: 7
ChIP density(Case|Control): 9675.4008|3111.654
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHOA ;
ROSE Overlap TCTA ; RHOA ; AMT ;
ROSE Proximal NICN1 ; GPX1 ; AMT ;
ROSE Closest RHOA ;
Lasso ;
PreSTIGE ;
ABC GPX1 ;
BETA USP4 ; DAG1 ; RHOA ; AMT ; TCTA ; NICN1 ; GPX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700413 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers