SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700394
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr19:43428860-43459729
Size: 30869
Super-enhancer rank 394
Number of SE elements: 5
ChIP density(Case|Control): 10297.8984|3519.066
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LYPD3 ;
ROSE Overlap ;
ROSE Proximal TEX101 ; PHLDB3 ; LYPD3 ;
ROSE Closest LYPD3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ETHE1 ; PHLDB3 ; TEX101 ; LYPD3 ; ZNF575 ; PRG1 ; CD177 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700394 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers