SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082700209
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr1:149923919-149943059
Size: 19140
Super-enhancer rank 209
Number of SE elements: 4
ChIP density(Case|Control): 11838.09|2329.338
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MTMR11 ;
ROSE Overlap SF3B4 ; OTUD7B ; MTMR11 ;
ROSE Proximal BOLA1 ; HIST2H2AB ; HIST2H2BE ; SV2A ; HIST2H2AC ;
ROSE Closest MTMR11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIST2H2AA3 ; HIST2H2BE ; SV2A ; HIST2H3A ; MTMR11 ; HIST2H2AB ; HIST2H4A ; HIST2H2AC ; SF3B4 ; HIST2H2BC ; HIST2H4B ; HIST2H2AA4 ; OTUD7B ; HIST2H3C ; BOLA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700209 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers