SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700207
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr12:56148994-56165807
Size: 16813
Super-enhancer rank 207
Number of SE elements: 4
ChIP density(Case|Control): 12238.1827|2710.2556
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MYL6 ;
ROSE Overlap MYL6 ; SMARCC2 ; MYL6B ;
ROSE Proximal ESYT1 ; ZC3H10 ; RPL41 ; PA2G4 ;
ROSE Closest MYL6 ;
Lasso MYL6 ; ZC3H10 ; SLC39A5 ; SMARCC2 ; ESYT1 ; PA2G4 ; MYL6B ; RP11-603J24.9 ;
PreSTIGE ;
ABC ;
BETA SMARCC2 ; MYL6 ; ZC3H10 ; MYL6B ; SLC39A5 ; ERBB3 ; PA2G4 ; RNF41 ; ESYT1 ; RPL41 ; NABP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700207 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers