SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082700156
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr1:32309374-32353213
Size: 43839
Super-enhancer rank 156
Number of SE elements: 9
ChIP density(Case|Control): 15418.1763|4449.6585
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MARCKSL1 ;
ROSE Overlap HDAC1 ; MARCKSL1 ;
ROSE Proximal FAM229A ; TSSK3 ; BSDC1 ; LCK ;
ROSE Closest MARCKSL1 ;
Lasso TSSK3 ; MARCKSL1 ;
PreSTIGE ;
ABC ;
BETA MTMR9LP ; LCK ; FAM229A ; TSSK3 ; HDAC1 ; FAM167B ; BSDC1 ; MARCKSL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700156 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers