SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700148
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr3:39118993-39156041
Size: 37048
Super-enhancer rank 148
Number of SE elements: 9
ChIP density(Case|Control): 14741.3992|3541.7888
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6822 ;
ROSE Overlap TTC21A ; CSRNP1 ; MIR6822 ;
ROSE Proximal GORASP1 ; XIRP1 ; TTC21A ;
ROSE Closest MIR6822 ;
Lasso ;
PreSTIGE ;
ABC GORASP1 ; TTC21A ;
BETA TTC21A ; GORASP1 ; XIRP1 ; CSRNP1 ; MIR6822 ; WDR48 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700148 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers