SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700133
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr19:6053632-6072210
Size: 18578
Super-enhancer rank 133
Number of SE elements: 11
ChIP density(Case|Control): 14078.4084|2199.6352
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RFX2 ;
ROSE Overlap RFX2 ;
ROSE Proximal ;
ROSE Closest RFX2 ;
Lasso ;
PreSTIGE ;
ABC RFX2 ; TNFSF9 ; LOC100128568 ; SLC25A23 ; RANBP3 ; MLLT1 ; FUT3 ; KHSRP ; GTF2F1 ; ALKBH7 ; CLPP ;
BETA RANBP3 ; ACSBG2 ; RFX2 ; LOC100128568 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700133 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers