SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700042
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr20:50088670-50162737
Size: 74067
Super-enhancer rank 42
Number of SE elements: 13
ChIP density(Case|Control): 28063.9863|9525.0162
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2V1 ;
ROSE Overlap UBE2V1 ; TMEM189 ; TMEM189-UBE2V1 ;
ROSE Proximal CEBPB-AS1 ; CEBPB ; UBE2V1 ; LINC01273 ; TRERNA1 ;
ROSE Closest UBE2V1 ;
Lasso TMEM189-UBE2V1 ; TMEM189 ;
PreSTIGE ;
ABC NFATC2 ;
BETA CEBPB ; UBE2V1 ; TRERNA1 ; TMEM189-UBE2V1 ; TMEM189 ; CEBPB-AS1 ; LINC01273 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700042 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers