SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700018
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr12:47775817-47838062
Size: 62245
Super-enhancer rank 18
Number of SE elements: 21
ChIP density(Case|Control): 31514.6435|6274.296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HDAC7 ;
ROSE Overlap SLC48A1 ; HDAC7 ;
ROSE Proximal HDAC7 ; RAPGEF3 ;
ROSE Closest HDAC7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA VDR ; ENDOU ; HDAC7 ; RAPGEF3 ; SLC48A1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700018 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers