SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_081800860
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Ovary
Biosample name: High-grade serous ovarian cancer
Genomic region: chr1:115644287-115732217
Size: 87930
Super-enhancer rank 860
Number of SE elements: 17
ChIP density(Case|Control): 27398.988|7570.773
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VANGL1 ;
ROSE Overlap VANGL1 ; CASQ2 ;
ROSE Proximal VANGL1 ;
ROSE Closest VANGL1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CASQ2 ; VANGL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_081800860 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers